Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916180.1_cds_XP_016465881.1_58790
CDS Infomation

[gene=LOC107788690] [db_xref=GeneID:107788690] [protein=serine carboxypeptidase-like 45] [protein_id=XP_016465881.1] [location=join(16423..16651,16724..16825,17263..17358,17702..17794,17912..17991,18289..18570,18688..18818,19183..19275,19406..19523,19622..19771)] [gbkey=CDS]
Sequence

ATGACATTGTCTATCTTCTTCTTTCTTCTTTGTGCTTTTGTGGGAATTGCGAATGGATTT
CCTCAACCAGACAAAATCATTCTTTTGCCTGGACAACCACAAGTGGGATTTCAACAATTT
TCAGGCTATGTTACTGTTGATGATAAGAAACAAAGAGCTCTCTTTTATTACTTTGTTGAA
GCAGAAATAAATCCAGCTTCTAAGCCTTTGGTTTTGTGGTTGAATGGGGGACCTGGTTGT
TCTTCTTTAGGTGTAGGTGCATTCTCTGAGAATGGTCCTTTTAGACCAAATGGACAAGTT
CTTGTTAAGAATAAGTACAGCTGGAACAAAGAGGCAAATATGTTGTATTTGGAGTCTCCA
ATTGGGGTTGGCTTCTCTTATTCAACTAATACATCTTCATATGAGACAGTTAATGATGTG
ACAACAGCTAGGGACAATGTTGTGTTCTTACAACGCTGGTTCAACAAATTCCCACAATAT
AGAAACAGCAATTTATTCTTAACTGGGGAGAGTTATGCAGGCCATTATGTACCTCAACTT
GCCAAGCTCATGATTGAGCTTAACCAGAAGAAAAAGTTGTTCAATCTGAAAGGAGTTGCA
TTGGGGAATCCGGTTCTGGAATTCGCTACTGACTTCAACTCGAGGGCTGAATATTTCTGG
TCTCATGGCCTAATATCAGATTCCACATACAGAATGTTCACTTCTTTTTGCAATTATTCT
CGTTACGTGAGTGAGTACTACAGGGACAATGTATCGCCAATGTGTTCAAGAGTCATGAGC
CTAGTAAGTAGAGAAACCAGTAAATTCGTTGATAAATATGACGTTACCCTGGATGTCTGT
CTCTCATCAGTGTTCTCTCAATCCAAAATTATATGTCCCCAAGAAAACGCTGATGCTGAG
AAGATAGATGTCTGCATCGATGATAAAACTGTCAATTACTTAAACCGAGAAGATGTTAGA
AGGGCTCTTCATGCCAAGCTTGTTGGAGTTCGCAGATGGGATGTTTGCAGCAACATTCTG
GATTATCAATTACTTGACATAGAGATACCAACAATCTCTATAGTAGGATTGCTTGTCAAG
GAGAGAATTCCAGTCTTAATTTACAGTGGGGATCAAGATTCTGTTGTTCCATTGACTGGA
AGCCGCACCGTCATACATCAACTAGCAAAACGGATGGGGCTTAACACAACTGTACCCTAT
AGAGTTTGGTTTGCAGGGCAGCAGGTTGGTGGATGGACTGTAGTGTATGATAATATTCTT
TCATTTGCCACCGTTAGAGGGGCTTCTCATGAAGTTCCTTTCTCTCAACCAGAGAGATCA
CTTGTTCTGTTCAAGTCATTTCTTGAAGGCAGGGCACTTCCTGAAGTATTCTGA

Peptide Sequence

PEP ID

XP_016465881.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 45 [Nicotiana tabacum]
Sequence

MTLSIFFFLLCAFVGIANGFPQPDKIILLPGQPQVGFQQFSGYVTVDDKKQRALFYYFVE
AEINPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVKNKYSWNKEANMLYLESP
IGVGFSYSTNTSSYETVNDVTTARDNVVFLQRWFNKFPQYRNSNLFLTGESYAGHYVPQL
AKLMIELNQKKKLFNLKGVALGNPVLEFATDFNSRAEYFWSHGLISDSTYRMFTSFCNYS
RYVSEYYRDNVSPMCSRVMSLVSRETSKFVDKYDVTLDVCLSSVFSQSKIICPQENADAE
KIDVCIDDKTVNYLNREDVRRALHAKLVGVRRWDVCSNILDYQLLDIEIPTISIVGLLVK
ERIPVLIYSGDQDSVVPLTGSRTVIHQLAKRMGLNTTVPYRVWFAGQQVGGWTVVYDNIL
SFATVRGASHEVPFSQPERSLVLFKSFLEGRALPEVF

Transcript Sequence

Gene sequence data has not been registered.